Teaching Software requirements 2020/21

When this project is complete, the final report will appear at TeachingSoftware2020Report

As this relates to Ubuntu, see also RaTPackagesToUbuntu

Key

Software Requirements, in order of priority

Priority	Acronym	Sem	Lecturer	Software	Change/no change/new	RT	Available on Ubuntu	Ubuntu status
1	DMP	S1	vvelichk/ayorston	DICE NOT REQUIRED
1	INF1A	S1	wadler/michael	Haskell ghci 8.10.2 Quickcheck GLUT	Haskell modulefile and needed; cabal needs testing for library installation	RT:103063	QuickCheck to be installed via cabal	Haskell 8.10.2 Quickcheck (n/a, cabal) 8.10 default (PATH) GLUT
1	INF2C-CS	S1	bgrot	gcc, java		RT:103035	YES	gcc java
1	INF2-FDS	Year	kgal/sterratt	DICE NOT REQUIRED
1	INF2-IADS	Year	mcryan/kk/jrl	Python (whatever is the current stable supported version on DICE).		RT:103413		Python 3.8
1.5	ANLP	S1	sgwater	Python 3.6 as installed on DICE with: nltk spyder scikit-learn		RT:101456	YES	Python 3.8 nltk (+corpora ) spyder scikit-learn
1.5	BIO1	S1	jda/timpson	DICE NOT REQUIRED
1.5	HCI	S1	kvaneia	DICE NOT REQUIRED		RT:103057	N/A
1.5	IDB	S1	pguaglia/libkin/apieris	A PostgreSQL 11.8 database for each student on the pgteach server, matching psql client version if possible. Various DB admin procedures requested. - psycopg2 Python library, 2.6.1 if possible.		RT:103276		- postgresql dbs - psql11 client - schema changes - psycopg 2.8
1.5	ILP	S1	stg/pbj	- Java SE 11. - Maven. (upstream 3.6.3-1) - Eclipse >= 4.10. v4.16 would be fine.		RT:103210		- JDK11 - Maven - Eclipse 4.18
1.5	MLP	Year	pandrea2/ hbilen/ sramamoo	- Conda - Python3 - Cuda - CudNN		RT:103199	Cuda/CudNN versions TBC - but on cluster, not on desktops	- Conda - Python3 - Cuda 11 (cluster) - CudNN 7,8 (cluster)
1.5	MLPR	S1	imurray	The SciPY "stack" fast BLAS		RT:103044	YES	SciPy stack libopenblas0
1.5	PI	S1	soa/jgarfort	DICE NOT REQUIRED
1.5	TTDS	Year	wmagdy/swilso22	- Python - 4G extra quota		RT:103414	Quota FAO services	Python 3.8 Extra quota
2	ADS	S1	jcb/rmayr	DICE NOT REQUIRED
2	BAI-ICDM	S1	doyarzun/timpson	No specific software required.		RT:103433
2	BDL	S1	akiayias/mkohlwei	DICE NOT REQUIRED
2	CDI1	S1	jlee/kvaniea/mwolters	DICE NOT REQUIRED
2	DBBA	S1	vrestocc/rsarkar	DICE NOT REQUIRED
2	IQC	S1	rgarcia/pwallden	Unclear if DICE required Reminder sent 21/08, 28/08		(2017 req) RT:83727		(2017) F# (2017) mono
2	IRR	S1	soa/rsarkar	DICE NOT REQUIRED
2	RSS	S1	zli33/mmistry	- python - jupyter=1.0.0 - matplotlib=2.2.3 - numpy=1.15.0 - scipy=1.1.0 - seaborn=0.9.0 - python-graphviz=0.8.4		RT:103583 (2017 req) RT:84975	phidget22 use pip install --user	(2017) phidget22 (2017) libusb-dev
2	SPT	S1	da/melahi/akiayias	DICE NOT REQUIRED
4	CDI2	S1	jlee/mwolters	DICE NOT REQUIRED
TBC	CiC	Year	judyr	DICE NOT REQUIRED
TBC	IAML	S1	omacaod/hshimoda/ckiw	- Python - Conda - pdflatex behaving differently (see RT:103510)		RT:103417 RT:103451 RT:103510		python-3.8 conda LATEX_RECOMMENDED (lastpage.sty)
TBC	IAML-PG	S1	omacaod/hshimoda/ckiw possibly tma1 too	↑ see IAML Reminder sent 21/08, 04/09		RT:103417 RT:103451		↑ See IAML
TBC	IPPO	S1	dcspaul	- Java 11 - JavaFX 11 - IntelliJ 2020.2 - SceneBuilder 11 - BlueJ - Gradle (version 6 if possible, 5.6 if not)		RT:100621 RT:103049 (IPPO as a subset of INF1B ) RT:103047 RT:103284	YES - but Gradle > 5.6 preferred	Java 11 - JavaFX 11 - IntelliJ - SceneBuilder - BlueJ - Gradle 4.4, 6.6
TBC	PDIOT	S1	dka, cxb	- git, make - arm embedded toolchain - Thingy52 software - NRF Tools - JLink support - anaconda - android studio		RT:103159	hardware stuff might be better as deps only; Android Studio in place but SDK probably user-installed.	- git, make - arm - NRF - JLink - Thingy52 - anaconda - android
TBC	IVR	S1	skhadem	ROS and Gazebo		RT:103039	dice/options/ros.h	ROS Gazebo
~	~	~	~	Line left blank intentionally	~	~	~	Line left blank intentionally
Priority	Acronym	Sem	Lecturer	Software	Change/no change/new	RT	Available on Ubuntu	Ubuntu status
1	INF1B	S2	fmcneill	SAME AS IPPO		RT:103049	- SEE IPPO -	- SEE IPPO -
1	INF1-CG	S2	mhennig/clucas2/fmollica	DICE NOT REQUIRED
1	INF2D	S2	alex/cchirita	nothing special possibly planning.domains? !QuickCheck !HUnit HSpec		RT:103043	optionals available via Cabal (for ghc 8.10.2)	mandatory: MetricFF planner Optional: HUnit (cabal) Optional: HSpec (cabal) +INF1A ↑
1	INF2-SEPP	S2	calexan4/dcspaul/jgarfort	Same as for IPPO: - Java 11 - JavaFX 11 - IntelliJ 2020.2 - SceneBuilder 11 - BlueJ - Gradle (6 or 5.6) Plus additional SEPP specific: - CodeGrade - JUnit5 for IntelliJ - Trac bug tracking, if possible. on a local server - the JaCoCo Java Code Coverage Library for IntelliJ - GitHub /GitHub Classroom but without server support from Informatics		RT:103283	CodeGrade is a service, no local s/w required we don't know what "for IntelliJ" means	(See IPPO) - JUnit5 - JaCoCo - A Trac server
1	SDP	S2	jgarfort/stonneau/bwebb	webots + python API - ROS - gazebo - blender - git - numpy & scipy - ipython/jupyter - gcc		RT:103250	webots python api built-in; please confirm?	webots + python API - ROS - gazebo - blender - git - numpy & scipy - ipython/jupyter - gcc - arduino (↑ 1.8)
1	THF	S2	mwolters	DICE NOT REQUIRED
1.5	AGTA	S2	kousha	Reminder sent 21/08, 04/09			(2019 req) RT:97537	(2017) MATLAB
1.5	COMN	S2	mhonda/mmarina	Reminder sent 21/08, 04/09			(2016 req) RT:78683, RT:80857	(2016) VirtualBox (2016) COMN VDI with DummyNet
1.5	CS	S2	mkohlwei, marapini, melahi	Based on 2019 requests: - python3 - pycrypto		RT:103083	pycrypto deprecated, insecure, replacements found	python3-cryptography python3-pycrptodome
1.5	DME	S2	mgutmann/srenals	Up-to-date packages for the Python Scientific Stack, including: - numpy - scipy - jupyter notebooks - pandas - scikit-learn - matplotlib - seaborn		RT:103262		- numpy - scipy - jupyter notebooks - pandas - scikit-learn - matplotlib - seaborn
1.5	NLU+	S2	keller	python3.6+ conda nltk scikit-learn pytorch numpy scipy tqdm matplotlib		RT:103058		python3.8 conda nltk scikit-learn pytorch numpy scipy tqdm matplotlib
1.5	OS	S2	abarbala	QEMU (x86)		RT:103189	possible future KVM integration	qemu-system optional: qemu-kvm
1.5	RL	S2	salbrec2	Latest available versions of: -pytorch -numpy -matplotlib -gym[atari] -gym[box2d] -tqdm -pytest		RT:103096	requested pytest plugins- no response	pytorch numpy matplotlib gym[atari] gym[box2d] tqdm pytest
1.5	ST	S2	arajan	- Eclipse IDE for Java (latest version (4.16) but 4.12 is OK) supporting JUnit 4 and JUnit 5 - EclEmma - Java code coverage tool within Eclipse - Randoop - Automated JUnit 4 test generation tool Instructions to download and run Randoop can be found here: https://randoop.github.io/randoop/manual/index.html - Java Development Kit (JDK) 8		RT:103341	EclEmma to be user-installed; eclipse needs some TLC for S2	Eclipse 4.18 Junit: 4 5 JDK8 randoop EclEmma N/A
2	AR	S2	jdf	- Isabelle2020 with HOL Heap prebuilt		RT:103042	done	Isabelle HOL
2	ADBS	S2	mnikolic/apieris	- gcc - Java - PostgreSQL		RT:103203		- gcc - Java - PostgreSQL
2	ASR	S2	pbell1	Kaldi and OpenFst (TA distributes local build but build-deps required). - python-openfst (nice to have) - pip - Jupyter		RT:103187		build-deps for Kaldi and OpenFST - Kaldi + pywrapfst (optional) - OpenFST - Intel MKL - OpenBLAS - gcc-8 - gfortran-dev - sox - pip - Jupyter
2	IMC	S2	vvelichk	DICE NOT REQUIRED
2	IoTSSC	S2	ppatras	DICE NOT REQUIRED
2	IPP	S2	soa/aconsta2	DICE NOT REQUIRED
2	PA	S2	vnagaraj	Reminder sent 21/08, 04/09
3	CCN	S2	achadwic/pseries	DICE NOT REQUIRED
4	BAI-GP	S2	doyarzun/tsimpson	No specific software required.		RT:103433
4	NLP-IP	S2	keller	DICE NOT REQUIRED
4	BAI-IP	Block 5 (Sem 2)+	doyarzun	No specific software required.		RT:103433
TBC	IAML-PG2	S2	tma1/hshimoda	↑ see IAML		RT:103417 RT:103451		↑ See IAML
TBC	IVC	S2	lsevilla	- matlab - python - pytorch		RT:103289		MATLAB PyTorch Python 3.8
TBC	DISS	Block 5 (Sem 2)+	rmayr	Nothing specific required, but submit requested		RT:103416
TBC	MDI	Flexible	mwolters	Run by Informatics, no specific requirements, but submit requested.
TBC	MIP1	Flexible	currently unallocated	Unclear if there is a MIP1
TBC	MIP2	Flexible	currently unallocated	Unclear if there is a MIP2
TBC	PROJ	Full Year	currently unallocated	Unclear if this is a course
TBC	WBPPCS	Block 5 (Sem 2)+	ayorston	DICE NOT REQUIRED

Teaching Software requirements 2020/21 (prior to 20th July 2020, this may be deprecated)

When this project is complete, the final report will appear at TeachingSoftware2020Report

Course	Semester	Lecturer	Software	Change/no change/new	SL7 Status	RT	Available on Ubuntu	Ubuntu status
CCS	N/A	clucas2	R, latest (https://cran.r-project.org/) RStudio, latest (https://rstudio.com/) RStan, latest (https://cran.r-project.org/web/packages/rstan/index.html) Matlab, latest Pandoc, latest	No Change	This course is not being delivered in 2020/21	RT:100540	MATLAB	R RStudio, RStan , Matlab Pandoc,
PM-DL	N/A	jeh	Matlab and Eclipse (not the modelling edition).	No change	This course is not being delivered in 2020/21	RT:100543	Upstream Eclipse 4.12 only.	Matlab Eclipse
IPPO	S1	dcspaul	- Java - IntelliJ - SceneBuilder - Gradle	Upgrade all to latest	Upgrades needed	RT:100621 Also see merged IPPO / INF1B RT:103049	YES	↑ See main list
ANLP	S1	sgwater	Python 3.6 as installed on DICE with nltk spyder scikit-learn	No Changes	Version checks required	RT:101456	YES	↑ See main list

-- RichardBell - 26 Feb 2020